Many Data Modelling Tools support Reverse Engineering which allows you to point the Tool at a physical and it will create a Data Model for you.
Unfortunately, it is not always so hot about relationships because often all it can do is make assumptions based on column names.
Unless it can interpret relationships stored in a Systems Catalogue.
I have done this with Oracle Designer which is kind of OK if you know what you are doing.
I suggest these steps :-
1) Check out some of the more expensive tools listed on this page :-
http://www.databaseanswers.org/modelling_tools.htm
2) Choose one with a free download (I like ERWin)
3) Download and use it and see if it meets your needs.
4) Do whatever seems appropriate.
Good luck !
B.Dimple
Senior DBA