Hi,
I get a "malformed packet" error when I call "LOAD DATA LOCAL INFILE". Does anyone know what may be causing this error? I don't think it matters, but here is the exact query that I'm running:
Code:
LOAD DATA LOCAL INFILE '/home/dbz/pdb/1F0L.pdb'
INTO TABLE protein_definitions
(@var1)
SET protein_id = '1F0L',
record_type = TRIM(SUBSTR(@var1,1,6)),
atom_id = TRIM(SUBSTR(@var1,7,5)),
atom_name = TRIM(SUBSTR(@var1,12,5)),
residue_abbrev = TRIM(SUBSTR(@var1,17,4)),
strand_id = TRIM(SUBSTR(@var1,21,2)),
sequence_id = TRIM(SUBSTR(@var1,23,4)),
x = TRIM(SUBSTR(@var1,32,7)),
y = TRIM(SUBSTR(@var1,40,7)),
z = TRIM(SUBSTR(@var1,48,7))