How big are the log files ? What are the patterns to these hiccups ? Have you thought about writing a small app(vb,perl) that corrects the file first then use dts to import the file - you could actually make this a part of your dts package (calling the app) ?
About writing an Application to correct the log file, this is exactuly what I am up to, and since DTS is providing a powerful tools through VBScript or VBJScript to have more control over the Transformation process, I have decided to use these tools.
There are some constants such as DTSTransformationSTATUS_Error, DTSTransformationSTATUS_ErrorInfo,.. etc . These constants can be used to control the flow of the Transformation process and to handle the errors if any.
I need an example using these constants to make things more clear for me to build my own application.